Publications

Articles Published at University of Oregon

  1. Larriba-Andaluz, C.; Prell, J.S. Fundamentals of Ion Mobility in the Free Molecular Regime: Interlacing the Past, Present, and Future of Ion Mobility Calculations. Int. Rev. Phys. Chem., 2020, in press.
  2. Zhang, J.D.; Donor, M.T.; Rolland, A.D.; Leeming, M.G.; Wang, H.; Trevitt, A.J.; Kabir, K.M.M.; Prell, J.S.; Donald, W.A. Protonation Isomers of Highly Charge Protein Ions Can Be Separated in FAIMS-MS. Int. J. Mass Spectrom. 2020, 457, 116425 DOI: 10.1016/j.ijms.2020.116425
  3. Wilson, J.W.; Donor, M.T.; Shepherd, S.O.; Prell, J.S. Increasing Collisional Activation of Protein Complexes Using Smaller Aperture Source Sampling Cones on a Synapt Q-IM-TOF Instrument With a StepWave Source. J. Am. Soc. Mass Spectrom. 2020, 31, 1751-1754 DOI: 10.1021/jasms.0c00117
  4. Miller, Z.M.; Zhang, J.D.; Donald, W.D.; Prell, J.S. Gas-Phase Protonation Thermodynamics of Biological Lipids: Experiment, Theory, and Implications. Anal. Chem. 2020, 92, 10365-10374 DOI: 10.1021/acs.analchem.0c00613
  5. Cleary, S.P.; Prell, J.S. Distinct Classes of Multi-Subunit Heterogeneity: Analysis using Fourier Transform Methods and Native Mass Spectrometry. Analyst 2020, 145, 4688-4697 DOI: 10.1039/D0AN00726A.
  6. Reardon, P.N.; Jara, K.A.; Rolland, A.D.; Smith, D.A.; Hoang, H.T.M.; Prell, J.S.; Barbar, E.J. The Dynein Light Chain 8 (LC8) Binds “In-Register” to Multivalent Instrinsically Disordered Partners. J. Biol. Chem. 2020, 295, 4912-4922 DOI: 10.1074/jbc.RA119.011653.
  7. Donor, M.T.; Shepherd, S.O.; Prell, J.S. Rapid Determination of Activation Energies for Gas-Phase Protein Folding and Dissociation in a Q-IM-ToF Mass Spectrometer. J. Am. Soc. Mass Spectrom. 202031, 602-610 DOI: 10.1021/jasms.9b00055.
  8. Townsend, J.; Keener, J.; Miller, Z.; Prell, J.S.; Marty, M.T. Imidazole Derivatives Improve Charge Reduction and Stabilization for Native Mass Spectrometry. Anal. Chem. 2019, 91, 14765-14772 DOI: 10.1021/acs.analchem.9b04263
  9. Wilson, J.W.; Rolland, A.D.; Klausen, G.M.; Prell, J.S. Ion Mobility-Mass Spectrometry Reveals that α-Hemolysin from Staphylococcus aureus Simultaneously Forms Hexameric and Heptameric Complexes in Detergent Micelle Solutions. Anal. Chem. 201991, 10204-10211 DOI: 10.1021/acs.analchem.9b02243
  10. Rolland, A.D.; Prell, J.S. Computational Insights into Compaction of Gas-Phase Protein and Protein Complex Ions in Native Ion Mobility-Mass Spectrometry. TrAC Trends Anal. Chem. 2019, 116, 282-291 DOI: 10.1016/j.trac.2019.04.023 [invited article for special issue on Ion Mobility Spectrometry]
  11. Donor, M.T.; Mroz, A.M.; Prell, J.S. Experimental and Computational Investigation of Overall Energy Deposition in Surface-Induced Unfolding of Protein Ions. Chem. Sci. 201910, 4097-4106 DOI: 10.1039/C9SC00644C
  12. Cleary, S.P.; Prell, J.S. Liberating Native Mass Spectrometry from Dependence on Volatile Salt Buffers by Use of Gábor Transform. ChemPhysChem 2019, 20, 519-523 DOI: 10.1002/cphc.201900022
  13. Keener, J.E.; Zambrano, D.E.; Zhang, G.; Zak, C.K.; Reid, D.J.; Deodhar, B.S.; Pemberton, J.E.; Prell, J.S.; Marty, M.T. Chemical Additives Enable Mass Spectrometry Measurement of Membrane Protein Oligomeric State Within Intact Nanodiscs. J. Am. Chem. Soc. 2019, 141, 1054-1061 DOI: 10.1021/jacs.8b11529
  14. Prell, J.S. Modelling Collisional Cross Sections, in Comprehensive Analytical Chemistry 83: Advances in Ion Mobility-Mass Spectrometry: Fundamentals, Instrumentation, and Applications, Elsevier, Amsterdam, 2019, 83, 1-22 DOI: 10.1016/bs.coac.2018.08.001
  15. Cleary, S.P.; Li, H.; Bagal, D.; Loo, J.A.; Campuzano, I.D.G.; Prell, J.S. Extracting Charge and Mass Information from Highly Congested Mass Spectra Using Fourier-Domain Harmonics. J. Am. Soc. Mass Spectrom., 201829, 2067-2080 DOI: 10.1007/s13361-018-2018-7 (download iFAMS here)
  16. Hartle, M.D.; Tillotson, M.R.; Prell, J.S.; Pluth, M.D. Spectroscopic Investigation of the Reaction of Metallo-Protoporphyrins with Hydrogen Sulfide. J. Inorg. Bio., 2017, 173, 152-157 DOI: 10.1016/j.jinorgbio.2017.04.021
  17. Donor, M.T.; Ewing, S.A.; Zenaidee, M.A.; Donald, W.A.; Prell, J.S. Extended Protein Ions are Formed by the Chain Ejection Model in Chemical Supercharging Electrospray Ionization. Anal. Chem. 2017, 89, 5107-5114 DOI: 10.1021/acs.analchem.7b00673
  18. Ewing, S.A.; Donor, M.T.; Wilson, J.W.; Prell, J.S. Collidoscope: An Improved Tool for Computing Collisional Cross Sections with the Trajectory Method. J. Am. Soc. Mass Spectrom.201728, 587-596 DOI: 10.1007/s13361-017-1594-2 [Focus Issue: Emerging Investigators] (download Collidoscope here)
  19. Wheeler, L.C.; Donor, M.T.; Prell, J.S.; Harms, M. J. Multiple Evolutionary Origins of Ubiquitous Cu2+ and Zn2+ Binding in the S100 Protein Family. PLOS ONE 2016, 11, e0164740 DOI: 10.1371/journal.pone.0164740
  20. Cleary, S.P.; Thompson, A.M.; Prell, J.S. Fourier Analysis Method for Analyzing Highly Congested Mass Spectra of Ion Populations with Repeated Subunits. Anal. Chem. 2016, 88, 6205-6213 DOI: 10.1021/acs.analchem.6b01088 (download iFAMS here)
  21. Taber, B.; Kislitsyn, D.A.; Gervasi, C.F.; Mills, J.M.; Rosenfield, A.E.; Zhang, L.; Mannsfeld, S.C.B.; Prell, J.S.; Briseno, A.L.; Nazin, G.V. Real-Space Visualization of Conformation-Dependent Oligothiophene Electronic Structure. J. Chem. Phys. 2016, 144, 194703 DOI: 10.1063/1.4949765
  22. Hartle, M.D.; Prell, J.S.; Pluth, M.D. Spectroscopic Investigations into the Binding of Hydrogen Sulfide to Synthetic Picket-Fence Porphyrins. J. Chem. Soc., Dalton Trans. 2016, 45, 4843-4853. DOI: 10.1039/C5DT04563K
  23. Kislitsyn, D.A.; Taber, B.; Gervasi, C.F.; Zhang, L.; Mannsfeld, S.C.B; Prell, J.S.; Briseno, A.; Nazin, G.Y. Oligothiophene Wires: Impact of Torsional Conformation on the Electron Structure. Phys. Chem. Chem. Phys. 2016, 18, 4842-4849. DOI: 10.1039/C5CP07092A

Books Edited

  1. Comprehensive Analytical Chemistry 83: Advances in Ion Mobility-Mass Spectrometry: Fundamentals, Instrumentation, and Applications. Donald, W.A. and Prell, J.S., ed. Elsevier, Amsterdam, 2019 ISBN: 978-0-444-64154-0, ISSN: 0166-526X

 

 

Publications Prior to University of Oregon

For a list of publications from work prior to the University of Oregon, please click here.