Publications

Articles Published at University of Oregon

  1. Meldrum K.L.; Swansiger, A.K.; Maus, A.D.; Koscho, J.; Miller, L.; Sausen, J.; Ladwig, P.M.; Willrich, A.V.; Prell J.S. Antibody Drug Quantitation from Human Serum using Liquid Chromatography/High-Resolution Accurate Mass Spectrometry and Gábor Transform Deconvolution, Chem. 2024, DOI: 10.1021/acs.analchem.4c04470. DOWNLOAD iFAMS QUANT HERE.
  2. Swansiger, A.K.; Crittenden, C.M.; Chan, S.A.; Yang, S.H.; Kou, D.; Prell, J.S.; Chen, B. Streamlining LC-MS Characterization of Pharmaceutical Polymers by Fourier-transform Based Deconvolution and Macromolecular Mass Defect Analysis. Anal. Chem., 2024, 96, 14715-14719. DOI: 10.1021/acs.analchem.4c02174.
  3. Prell, J.S. Modeling Collisional Kinetic Energy Damping, Heating, and Cooling of Ions in Mass Spectrometry: a Tutorial Perspective. Int. J. Mass Spectrom. 2024, 504, 117290. [cover article, invited Young Scientists Feature article] DOI: 10.1016/j.ijms.2024.117290 [click here to read free of charge]
  4. Meldrum, K.L.; Swansiger, A.K.; Daniels, M.M.; Hale, W.A.; Kirmiz Cody, C.; Qiu, X.; Knierman, M.; Sausen, J.; Prell, J.S. Gábor Transform-Based Signal Isolation, Rapid Deconvolution, and Quantitation of Intact Protein Ions with Mass Spectrometry. Anal. Chem., 2024, 96, 9512-9523 DOI: 10.1021/acs.analchem.4c00978. DOWNLOAD iFAMS QUANT HERE.
  5. Tang, S.; Pederson, Z.; Meany, E.; Yen, C.-W.; Swansiger, A.K.; Prell, J.S.; Chen. B.; Grosskopf, A.; Eckman, N.; Jiang, G.; Baillet, J.; Pellett, J.; Appel, E. Label-Free Composition Analysis of Supramolecular Polymer-Nanoparticle Hydrogels by Reversed-Phase Liquid Chromatography Coupled with a Charge Aerosol Detector. Anal. Chem. 2024, 96, 5860-5868 DOI: 10.1021/acs.analchem.3c05747
  6. Wu, D.; Yan, R.; Song, S.; Swansiger, A.K.; Li, Y.; Prell, J.S.; Zhou, Q.; Robinson, C.V. The Complete Assembly of Human LAT1-4F2hc Complex Provides Insights into its Regulation, Function and Localisation. Nat. Commun. 2024, 57, 3711 DOI: 10.1038/s41467-024-47948-4.
  7. Shepherd, S.O.; Green, A.W.; Resendiz, E.S.; Newton, K.R.; Kurulugama, R.T.; Prell, J.S. Effects of Nano-Electrospray Ionization Emitter Position on Unintentional In-Source Activation of Protein and Peptide Ions. J. Am. Soc. Mass Spectrom. 2024, 35, 498-507 DOI: 10.1021/jasms.3c00371
  8. Dorogin, J.; Hochstatter, H.B.; Shepherd, S.O.; Svendsen, J.E.; Benz, M.A.; Powers, A.C.; Fear, K.M.; Townsend, J.M.; Prell, J.S.; Hosseinzadeh, P.; Hettiaratchi, M.H. Moderate-Affinity Affibodies Modulate the Delivery and Bioactivity of Bone Morphogenetic Protein-2. Adv. Healthc. Mater. 2023, 12, 2300793 DOI: 10.1002/adhm.202300793
  9. Rolland, A.D.; Takata, T.; Donor, M.T.; Lampi, K.J.; Prell, J.S. Eye Lens β-Crystallins are Predicted by Native Ion Mobility-Mass Spectrometry and Computations to Form Compact High-Ordered Heterooligomers. Structure 2023, 31, 1052-1064.e3 DOI: 10.1016/j.str.2023.06.013
  10. Walker, D.R.; Jara, K.A.; Rolland, A.D.; Brooks, C.; Hare, W.; Swansiger, A.K.; Reardon, P.N.; Prell, J.S.; Barbar, E.J. Linker Length Drives Heterogeneity of LC8/ASCIZ Multivalent Complexes. Biomolecules 2023, 13, 404, DOI: 10.3390/biom13030404
  11. Turzo, S.M.B.A.; Seffernick, J.T.; Rolland, A.D.; Donor, M.T.; Heinze, S.; Prell, J.S.; Wysocki, V.H.; Lindert, S. Protein Shape Sampled by Ion Mobility Mass Spectrometry Consistently Improves Protein Structure Prediction. Nat. Comm. 2022, 13, 4377, DOI: 10.1038/s41467-022-32075-9.
  12. Rolland, A.D.; Biberic, L.S.; Prell, J.S. Investigation of Charge-State-Dependent Compaction of Protein Ions with Native Ion Mobility-Mass Spectrometry and Theory. J. Am. Soc. Mass Spectrom. 2022, 33, 369-381, DOI: 10.1021/jasms.1c00351.
  13. Swansiger, A.K.; Marty, M.T.; Prell, J.S. Fourier-Transform Approach for Reconstructing Macromolecular Mass Defect Profiles. J. Am. Soc. Mass Spectrom. 2022, 33, 172-180 DOI: 10.1021/jasms.1c00317
  14. Townsend, J.; Sanders, H.; Rolland, A.D.; Park, C.; Horton, N.; Prell, J.S.; Wang, J.; Marty, M.T.* Influenza A M2 Channel Oligomerization is Sensitive to its Chemical Environment. Anal. Chem. 2021, 93, 16273-16281, DOI: 10.1021/acs.analchem.1c04660
  15. Rolland, A.D.; Prell, J.S. Approaches to Heterogeneity in Native Mass Spectrometry. Chem. Rev. 2021, DOI: 10.1021/acs.chemrev.1c00696. [invited review for special issue on Mass Spectrometry Applications in Structural Biology]
  16. Donor, M.T.; Wilson, J.W.; Shepherd, S.O.; Prell, J.S. Lipid Head Group Adduction to Soluble Proteins Follows Gas-Phase Basicity Predictions: Dissociation Barriers and Charge Abstraction. Int. J. Mass Spectrom. 2021, 469, 116670 DOI: 10.1016/j.ijms.2021.116670. [invited article for special issue on Native Mass Spectrometry in Structural Biology]
  17. Forsythe, H.M.; Rodriguez Galvan, J.; Yu, Z.; Pinckney, S.; Reardon, P.N.; Cooley, R.B.; Zhu, P.; Rolland, A.D.; Prell, J.S.; Barbar, E.J. Multivalent Binding of the Partially Disordered SARS-CoV-2 Nucleocapsid Phosphoprotein to RNA. Biophys. J. 2021, 120, 1-12  DOI: 10.1016/j.bpj.2021.03.023.
  18. Cheung See Kit, M.; Shepherd, S.O.; Prell, J.S.; Webb, I.K. Experimental Determination of Activation Energies for Covalent Bond Formation via Ion/Ion Reactions and Competing Processes. J. Am. Soc. Mass Spectrom. 2021, 32, 2313-2321 DOI: 10.1021/jasms.1c00025.
  19. Baker, K.; Kwok, E.; Reardon, P.; Rodriguez, D.J.; Rolland, A.D.; Wilson, J.W.; Prell, J.S.; Nyarko, A. Yorkie-Warts Complexes are an Ensemble of Interconverting Conformers Formed by Multivalent Interactions. J. Mol. Bio. 2020, 433, 166776 DOI: 10.1016/j.jmb.2020.166776.
  20. Larriba-Andaluz, C.; Prell, J.S. Fundamentals of Ion Mobility in the Free Molecular Regime: Interlacing the Past, Present, and Future of Ion Mobility Calculations. Int. Rev. Phys. Chem., 2020, 39, 569-623 DOI: 10.1080/0144235X.2020.1826708
  21. Zhang, J.D.; Donor, M.T.; Rolland, A.D.; Leeming, M.G.; Wang, H.; Trevitt, A.J.; Kabir, K.M.M.; Prell, J.S.; Donald, W.A. Protonation Isomers of Highly Charge Protein Ions Can Be Separated in FAIMS-MS. Int. J. Mass Spectrom. 2020, 457, 116425 DOI: 10.1016/j.ijms.2020.116425
  22. Wilson, J.W.; Donor, M.T.; Shepherd, S.O.; Prell, J.S. Increasing Collisional Activation of Protein Complexes Using Smaller Aperture Source Sampling Cones on a Synapt Q-IM-TOF Instrument With a StepWave Source. J. Am. Soc. Mass Spectrom. 2020, 31, 1751-1754 DOI: 10.1021/jasms.0c00117
  23. Miller, Z.M.; Zhang, J.D.; Donald, W.D.; Prell, J.S. Gas-Phase Protonation Thermodynamics of Biological Lipids: Experiment, Theory, and Implications. Anal. Chem. 2020, 92, 10365-10374 DOI: 10.1021/acs.analchem.0c00613
  24. Cleary, S.P.; Prell, J.S. Distinct Classes of Multi-Subunit Heterogeneity: Analysis using Fourier Transform Methods and Native Mass Spectrometry. Analyst 2020, 145, 4688-4697 DOI: 10.1039/D0AN00726A.
  25. Reardon, P.N.; Jara, K.A.; Rolland, A.D.; Smith, D.A.; Hoang, H.T.M.; Prell, J.S.; Barbar, E.J. The Dynein Light Chain 8 (LC8) Binds “In-Register” to Multivalent Instrinsically Disordered Partners. J. Biol. Chem. 2020, 295, 4912-4922 DOI: 10.1074/jbc.RA119.011653.
  26. Donor, M.T.; Shepherd, S.O.; Prell, J.S. Rapid Determination of Activation Energies for Gas-Phase Protein Folding and Dissociation in a Q-IM-ToF Mass Spectrometer. J. Am. Soc. Mass Spectrom. 2020, 31, 602-610 DOI: 10.1021/jasms.9b00055. [featured as “highly cited” among Ion Mobility-related articles in 2019 and 2020 JASMS]
  27. Townsend, J.; Keener, J.; Miller, Z.; Prell, J.S.; Marty, M.T. Imidazole Derivatives Improve Charge Reduction and Stabilization for Native Mass Spectrometry. Anal. Chem. 2019, 91, 14765-14772 DOI: 10.1021/acs.analchem.9b04263
  28. Wilson, J.W.; Rolland, A.D.; Klausen, G.M.; Prell, J.S. Ion Mobility-Mass Spectrometry Reveals that α-Hemolysin from Staphylococcus aureus Simultaneously Forms Hexameric and Heptameric Complexes in Detergent Micelle Solutions. Anal. Chem. 2019, 91, 10204-10211 DOI: 10.1021/acs.analchem.9b02243
  29. Rolland, A.D.; Prell, J.S. Computational Insights into Compaction of Gas-Phase Protein and Protein Complex Ions in Native Ion Mobility-Mass Spectrometry. TrAC Trends Anal. Chem. 2019, 116, 282-291 DOI: 10.1016/j.trac.2019.04.023 [invited article for special issue on Ion Mobility Spectrometry]
  30. Donor, M.T.; Mroz, A.M.; Prell, J.S. Experimental and Computational Investigation of Overall Energy Deposition in Surface-Induced Unfolding of Protein Ions. Chem. Sci. 2019, 10, 4097-4106 DOI: 10.1039/C9SC00644C
  31. Cleary, S.P.; Prell, J.S. Liberating Native Mass Spectrometry from Dependence on Volatile Salt Buffers by Use of Gábor Transform. ChemPhysChem 2019, 20, 519-523 DOI: 10.1002/cphc.201900022
  32. Keener, J.E.; Zambrano, D.E.; Zhang, G.; Zak, C.K.; Reid, D.J.; Deodhar, B.S.; Pemberton, J.E.; Prell, J.S.; Marty, M.T. Chemical Additives Enable Mass Spectrometry Measurement of Membrane Protein Oligomeric State Within Intact Nanodiscs. J. Am. Chem. Soc. 2019, 141, 1054-1061 DOI: 10.1021/jacs.8b11529
  33. Prell, J.S. Modelling Collisional Cross Sections, in Comprehensive Analytical Chemistry 83: Advances in Ion Mobility-Mass Spectrometry: Fundamentals, Instrumentation, and Applications, Elsevier, Amsterdam, 2019, 83, 1-22 DOI: 10.1016/bs.coac.2018.08.001
  34. Cleary, S.P.; Li, H.; Bagal, D.; Loo, J.A.; Campuzano, I.D.G.; Prell, J.S. Extracting Charge and Mass Information from Highly Congested Mass Spectra Using Fourier-Domain Harmonics. J. Am. Soc. Mass Spectrom., 2018, 29, 2067-2080 DOI: 10.1007/s13361-018-2018-7 (download iFAMS here)
  35. Hartle, M.D.; Tillotson, M.R.; Prell, J.S.; Pluth, M.D. Spectroscopic Investigation of the Reaction of Metallo-Protoporphyrins with Hydrogen Sulfide. J. Inorg. Bio., 2017, 173, 152-157 DOI: 10.1016/j.jinorgbio.2017.04.021
  36. Donor, M.T.; Ewing, S.A.; Zenaidee, M.A.; Donald, W.A.; Prell, J.S. Extended Protein Ions are Formed by the Chain Ejection Model in Chemical Supercharging Electrospray Ionization. Anal. Chem. 2017, 89, 5107-5114 DOI: 10.1021/acs.analchem.7b00673
  37. Ewing, S.A.; Donor, M.T.; Wilson, J.W.; Prell, J.S. Collidoscope: An Improved Tool for Computing Collisional Cross Sections with the Trajectory Method. J. Am. Soc. Mass Spectrom., 2017, 28, 587-596 DOI: 10.1007/s13361-017-1594-2 [Focus Issue: Emerging Investigators] (download Collidoscope here)
  38. Wheeler, L.C.; Donor, M.T.; Prell, J.S.; Harms, M. J. Multiple Evolutionary Origins of Ubiquitous Cu2+ and Zn2+ Binding in the S100 Protein Family. PLOS ONE 2016, 11, e0164740 DOI: 10.1371/journal.pone.0164740
  39. Cleary, S.P.; Thompson, A.M.; Prell, J.S. Fourier Analysis Method for Analyzing Highly Congested Mass Spectra of Ion Populations with Repeated Subunits. Anal. Chem. 2016, 88, 6205-6213 DOI: 10.1021/acs.analchem.6b01088 (download iFAMS here)
  40. Taber, B.; Kislitsyn, D.A.; Gervasi, C.F.; Mills, J.M.; Rosenfield, A.E.; Zhang, L.; Mannsfeld, S.C.B.; Prell, J.S.; Briseno, A.L.; Nazin, G.V. Real-Space Visualization of Conformation-Dependent Oligothiophene Electronic Structure. J. Chem. Phys. 2016, 144, 194703 DOI: 10.1063/1.4949765
  41. Hartle, M.D.; Prell, J.S.; Pluth, M.D. Spectroscopic Investigations into the Binding of Hydrogen Sulfide to Synthetic Picket-Fence Porphyrins. J. Chem. Soc., Dalton Trans. 2016, 45, 4843-4853. DOI: 10.1039/C5DT04563K
  42. Kislitsyn, D.A.; Taber, B.; Gervasi, C.F.; Zhang, L.; Mannsfeld, S.C.B; Prell, J.S.; Briseno, A.; Nazin, G.Y. Oligothiophene Wires: Impact of Torsional Conformation on the Electron Structure. Phys. Chem. Chem. Phys. 2016, 18, 4842-4849. DOI: 10.1039/C5CP07092A

Books Edited

  1. Comprehensive Analytical Chemistry 83: Advances in Ion Mobility-Mass Spectrometry: Fundamentals, Instrumentation, and Applications. Donald, W.A. and Prell, J.S., ed. Elsevier, Amsterdam, 2019 ISBN: 978-0-444-64154-0, ISSN: 0166-526X

 

 

Publications Prior to University of Oregon

  1. Tanyag, R.M.P.; Bacellar, C.; Pang, W.; Bernardo, C.; Gomez, L.F.; Jones, C.F.; Ferguson, K.R.; Kwok, J.; Anielski, D.; Belkacem, A.; Boll, R.; Bozek, J.; Carron, S.; Chen, G.; Delmas, T.; Englert, L.; Epp, S.W.; Erk, B.; Foucar, L.; Hartmann, R.; Hexemer, A.; Huth, M.; Leone, S.R.; Ma, J.H.; Marchesini, S.; Neumark, D.M.; Poon, B.K.; Prell, J.S.; Rolles, D.; Rudek, B.; Rudenko, A.; Seifrid, M.; Swiggers, M.; Ullrich, J.; Weise, F.; Zwart, P.; Bostedt, C.; Gessner, O.; Vilesov, A.F. Sizes of Pure and Doped Helium Droplets from Single-Shot X-Ray Imaging. J. Chem. Phys., 2022, in press DOI: 10.1063/5.0080342
  2. Zürch, M.; Chang, H.-T.; Kraus, P. M.; Cushing, S. K.; Borja, L. J.; Gandman, A.; Kaplan, C. J.; Oh, M. H.; Prell, J. S.; Prendergast, D.; Pemmaraju, C. D.; Neumark, D. M.; Leone, S. R. Carrier Trapping and Thermalization in Silicon-Germanium Alloy Probed by Attosecond XUV Transient Absorption Spectroscopy. Structural Dynamics 2017, 4, 044029 DOI: 10.1063/1.4985056
  3. Zürch, M.; Chang, H.-T.; Borja, L.J.; Kraus, P.M.; Cushing, S.K.; Gandman, A.; Kaplan, C.J.; Oh, M.H.; Prell, J.S.; Prendergast, D.; Pemmaraju, C.D.; Neumark, D.M.; Leone, S.R. Direct and Simultaneous Observation of Ultrafast Electron and Hole Dynamics in Germanium. Nature Comm. 2017, 8, 15734. DOI: 10.1038/ncomms15734
  4. Borja, L. J.; Zürch, M.; Pemmaraju, C. D.; Schultze, M.; Ramasesha, K.; Gandman, A.; Prell, J. S.; Prendergast, D.; Neumark, D. M.; Leone, S. R. Extreme Ultraviolet Transient Absorption of Solids from Femtosecond to Attosecond Timescales. J. Opt. Soc. Am. B 2016, 33, C57-C64.
  5. Schultze, M.; Ramasesha, K.; Pemmaraju, C.D.; Sato, S.A.; Whitmore, D.; Gandman, A.; Prell, J.S.; Borja, L.; Prendergast, D.; Yabana, K.; Neumark, D.M.; Leone, S.R. Attosecond Band Gap Dynamics in Silicon. Science 2014, 346, 1348-1352. DOI: 10.1126/science.1260311
  6. Gomez, L.F.; Ferguson, K.R.; Cryan, J.P.; Bacellar, C.; Tanyag, R.M.P.; Jones, C.; Schorb, S.; Anielski, D.; Belkacem, A.; Bernando, C.; Boll, R.; Bozek, J.; Carron, S.; Chen, G.; Delmas, T.; Englert, L.; Epp, S.W.; Erk, B.; Foucar, L.; Hartmann, R.; Hexemer, A.; Huth, M.; Kwok, J.; Leone, S.R.; Ma, J.H.S.; Maia, F.R.N.C.; Malmerberg, E.; Marchesini, S.; Neumark, D.M.; Poon, B.; Prell, J.; Rolles, D.; Rudek, B.; Rudenko, A.; Seifrid, M.; Siefermann, K.R.; Sturm, F.P.; Swiggers, M.; Ulrich, J.; Weise, F.; Zwart, P.; Bostedt, C.; Gessner, O.; Vilesov, A.F. Shapes and Vorticities of Superfluid Helium Droplets. Science 2014, 345, 906-909. DOI: 10.1126/science.1252395
  7. Prell, J.S.; Borja, L.J.; Neumark, D.M.; Leone, S.R. Simulation of Attosecond-Resolved Imaging of the Plasmon Electric Field in Metallic Nanoparticles. Ann. Phys.—Berlin 2013, 525, 151-161. DOI: 10.1002/andp.201200201
  8. Nagel, P.M.; Robinson, J.S.; Harteneck, B.; Pfeifer, T.; Abel, M.J.; Prell, J.S.; Neumark, D.M.; Kaindl, R.A.; Leone, S.R. Surface Plasmon Assisted Electron Acceleration in Photoemission from Gold Nanopillars. Chem. Phys. 2013, 414, 106-111. DOI: 10.1016/j.chemphys.2012.03.013
  9. Chang, T.M.; Prell, J.S.; Warrick, E.R.; Williams, E.R. Where’s the Charge? Protonation Sites in Gaseous Ions Change with Hydration. J. Am. Chem. Soc. 2012, 134, 15805-15813. DOI: 10.1021/ja304929h
  10. Sterling, H.J; Prell, J.S.; Cassou, C.A.; Williams, E.R. Protein Conformation and Supercharging with DMSO from Aqueous Solution. J. Am. Soc. Mass Spectrom. 2011, 22, 1178–1186. DOI: 10.1007/s13361-011-0116-x
  11. Prell, J.S.; Chang, T.M.; Biles, J.A.; Berden, G.; Oomens, J.; Williams, E.R. Isomer Population Analysis of Gaseous Ions from Infrared Multiple Photon Dissociation Spectroscopy. J. Phys. Chem. A 2011, 115, 2745–2751. DOI: 10.1021/jp2004166
  12. Prell, J.S.; O’Brien, J.T.; Williams, E.R. Structural and Electric Field Effects of Ions in Aqueous Nanodrops. J. Am. Chem. Soc. 2011, 133, 4810–4818. DOI: 10.1021/ja108341t
  13. Prell, J.S.; Correra, T.C.; Chang, T.M.; Biles, J.A.; Williams, E.R. Entropy Drives a Water Molecule from the C- to N-Terminus on Protonated Proline. J. Am. Chem. Soc. 2010, 132, 14733–14735. DOI: 10.1021/ja106167d
  14. O’Brien, J.T.; Prell, J.S.; Berden, G.; Oomens, J.; Williams, E.R. Effects of Anions on the Zwitterion Stability of Glu, His, and Arg Investigated by IRMPD Spectroscopy and Theory. Int. J. Mass Spectrom. 2010, 297, 116–123. DOI: 10.1016/j.ijms.2010.07.003
  15. O’Brien, J.T.; Prell, J.S.; Williams, E.R. Sulfate Ion Patterns Water at Long Distance. J. Am. Chem. Soc. 2010, 132, 8248–8249. DOI: 10.1021/ja1024113
  16. Prell, J.S.; Chang, T.M.; O’Brien, J.T.; Williams, E.R. Hydration Isomers of Protonated Phenylalanine and Derivatives: Relative Stabilities from Infrared Photodissociation. J. Am. Chem. Soc. 2010, 132, 7811–7819. DOI: 10.1021/ja102765w
  17. Prell, J.S.; O’Brien, J.T.; Williams, E.R. IRPD Spectroscopy and Ensemble Measurements: Effects of Different Data Acquisition and Analysis Methods. J. Am. Soc. Mass Spectrom. 2010, 21, 800–809. DOI: 10.1016/j.jasms.2010.01.010
  18. Prell, J.S.; Flick, T.G.; Oomens, J.; Berden, G.; Williams, E.R. Coordination of Trivalent Metal Cations to Peptides: Results from IRMPD Spectroscopy and Theory. J. Phys. Chem. A 2010, 114, 854–860. DOI: 10.1021/jp909366a
  19. Bush, M.F.; O’Brien, J.T.; Prell, J.S.; Wu, C.; Saykally, R.J.; Williams, E. R. Hydration of Alkaline Earth Metal Dications: Effects of Metal Ion Size Determined Using Infrared Action Spectroscopy. J. Am. Chem. Soc. 2009, 131, 13270–13277. DOI: 10.1021/ja901011x
  20. Donald, W.A.; Leib, R.D.; Demireva, M.; O’Brien, J.T.; Prell, J.S.; Williams, E.R. Directly Relating Reduction Energies of Gaseous Eu(H2O)n3+, n = 55-140, to Aqueous Solutions: The Absolute SHE Potential and Real Proton Solvation Energy. J. Am. Chem. Soc. 2009, 131, 13328–13337. DOI: 10.1021/ja902815v
  21. Prell, J.S.; O’Brien, J.T.; Steill, J.D.; Oomens, J.; Williams, E.R. Structures of Protonated Dipeptides: The Role of Arginine in Stabilizing Salt Bridges. J. Am. Chem. Soc. 2009, 131, 11442–11449. DOI: 10.1021/ja901870d
  22. Prell, J.S.; Williams, E.R. Structures of Thermal, Mass-Selected Water Clusters Probed with Hydrophobic Ion Tags and Infrared Photodissociation Spectroscopy. J. Am. Chem. Soc. 2009, 131, 4110–4119. DOI: 10.1021/ja809414a
  23. O’Brien, J.T.; Prell, J.S.; Steill, J.D.; Oomens, J.; Williams, E.R. Changes in Binding Motif of Protonated Heterodimers Containing Valine Investigated Using IRMPD Spectroscopy between 800 and 3700 cm−1 and Theory. J. Am. Chem. Soc. 2009, 131, 3905-3912. DOI: 10.1021/ja809928h
  24. Prell, J.S.; Demireva, M.; Williams, E.R. Role of Sequence in Salt-Bridge Formation for Alkali Metal Cationized GlyArg and ArgGly Investigated with IRMPD Spectroscopy and Theory. J. Am. Chem. Soc. 2009, 131, 1232–1242. DOI: 10.1021/ja808177z
  25. O’Brien, J.T.; Prell, J.S.; Steill, J.D.; Oomens, J.; Williams, E.R. Interactions of Mono- and Divalent Metal Cations with Aspartic and Glutamic Acid Investigated with Infrared Photodissociation Spectroscopy and Theory. J. Phys. Chem. A 2008, 112, 10823–10830. DOI: 10.1021/jp805787e
  26. Prell, J.S.; O’Brien, J.T.; Holm, A.I.S.; Leib, R.D.; Donald, W.A.; Williams, E.R. Electron Capture Dissociation by a Hydrated Gaseous Peptide: Effects of Water on Fragmentation and Molecular Survival. J. Am. Chem. Soc. 2008, 130, 12680–12689. DOI: 10.1021/ja8022434
  27. O’Brien, J.T.; Prell, J.S.; Holm, A.I.S.; Williams, E.R. Effects of Electron Kinetic Energy and Ion-Electron Inelastic Collisions in Electron Capture Dissociation Measured Using Ion Nanocalorimetry. J. Am. Soc. Mass Spectrom. 2008, 19, 772–779. DOI: 10.1016/j.jasms.2008.02.010
  28. Bush, M.F.; Prell, J.S.; Saykally, R.J.; Williams, E.R. One Water Molecule Stabilizes the Cationized Arginine Zwitterion. J. Am. Chem. Soc. 2007, 129, 13544–13553. DOI: 10.1021/ja073796b
  29. Bush, M.F.; O’Brien, J.T.; Prell, J.S.; Saykally, R.J.; Williams, E.R. Infrared Spectroscopy of Cationized Arginine in the Gas Phase: Direct Evidence for the Transition from Nonzwitterionic to Zwitterionic Structure. J. Am. Chem. Soc. 2007, 129, 1612–1622. DOI: 10.1021/ja066335j
  30. Gaspar, P.P.; Liu, X.P.; Ivanova, D.; Read, D.; Prell, J.S.; Gross, M.L. Four Valence-Electron Reactive Intermediates and the Philicity of Charged Carbene Analogs. Modern Aspects of Main Group Chemistry 2006, 917, 52–65.